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Add STRAGLR module - #12644

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lukejroche wants to merge 1 commit into
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lukejroche:new-module-straglr
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Add STRAGLR module#12644
lukejroche wants to merge 1 commit into
nf-core:masterfrom
lukejroche:new-module-straglr

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@lukejroche

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This PR adds new module straglr for long-read short-trandem repeat calling.

Closes #12640 #12640

  • [x ] This comment contains a description of changes (with reason).
  • [x ] If you've fixed a bug or added code that should be tested, add tests!
  • [x ] If you've added a new tool - have you followed the module conventions in the contribution docs
  • [x ] If necessary, include test data in your PR.
  • [x ] Remove all TODO statements.
  • [x ] Broadcast software version numbers to topic: versions - See version_topics
  • [x ] Follow the naming conventions.
  • [x ] Follow the parameters requirements.
  • [x ] Follow the input/output options guidelines.
  • [x ] Add a resource label
  • [x ] Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • [x ] nf-core modules test <MODULE> --profile docker
      • nf-core modules test <MODULE> --profile singularity
      • nf-core modules test <MODULE> --profile conda

@lukejroche

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"test_snap_versions" lint failure - the version is definitely present in the snapshot file but there is no "version" string name in the file so i assume linting cannot see that the version is actually present?

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new module: STRAGLR

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