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Patch statistics for multiallelic data
CI
#340:
Pull request
#184
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andrewkern
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nsp-multiallelic-trunk
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Patch statistics for multiallelic data
CI
#339:
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#184
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add Gram matrix fast path for pairwise_distance
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add Gram matrix fast path for ZnS computation
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Patch statistics for multiallelic data
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One window grid and one membership rule across the windowed engines
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One window grid and one membership rule across the windowed engines
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One window grid and one membership rule across the windowed engines
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Merge pull request #178 from kr-colab/fix/172-subset-from-range-coord…
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Validate get_subset_from_range against coordinates, not variant count
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Merge pull request #165 from kr-colab/data/reencode-example-x-vcz
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Add full X-chromosome example dataset as VCF Zarr
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Unify the biallelic definition across GenotypeMatrix loaders and make biallelic restriction evident with warning
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Merge pull request #162 from molpopgen/fix_pip_command
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Multiallelic-correct statistics: integrate nsp-multiallelic-trunk into main
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Pin statistics across implementations in a parity test suite
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test/implementation-parity
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Pin statistics across implementations in a parity test suite
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#321:
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Merge pull request #126 from kr-colab/feature/moments-ld-use-genotype…
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moments_ld: default use_genotypes=True to match moments
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moments_ld: default use_genotypes=True to match moments
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feature/moments-ld-use-genotypes-default
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Merge pull request #122 from kr-colab/feature/haploid-detection
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Detect haploid / hemizygous input at load time
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Merge pull request #124 from kr-colab/fix/dz-genotype-missing-data-nan
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Fix NaN in genotype LD stats with missing data in small populations
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1m 26s
fix/dz-genotype-missing-data-nan
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Detect haploid / hemizygous input at load time
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