Professor Morten Nielsen's Immunoinformatics and Machine Learning Lab at DTU Bioinformatics
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Repositories
- AbEpiTope-1.0 Public
AbEpiTope-1.0 is a computational tool that features two scores: AbEpiScore-1.0, designed for assessing the accuracy of modelled AbAg interfaces, and AbEpiTarget-1.0, optimised for selecting the antibody most likely to bind a given antigen.
- ImmunoGeNN Public
- NetTCR-struc Public
- gefion-containers Public
Code and guides for setting up apptainer containers on Gefion HPC to run AlphaFold, Chai, BepiPocket, Boltz, Boltzgen
- tcrcluster_backend Public
- AbAgIoU Public
Computing the IoU metrics for evaluating the modelling accuracy of antibody-antigen complexes
- ImmunoMSA Public
Repo containing code and workflows for creating MSA inputs for structural modelling (AlphaFold, Chai1, Boltz etc.)
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