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  • Cleveland Clinic
  • Cleveland, OH
  • LinkedIn in/hboyes

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boyeshenry-byte/README.md

Hi, I'm Henry πŸ‘‹

Data/ML Engineer building production data pipelines in healthcare and biotech. Currently a Research Technician II at Cleveland Clinic's Center for Immunotherapy and Precision Immuno-Oncology, where my work spans ML pipeline development, spatial proteomics analysis, and clinical database management β€” well beyond the title.

🎯 Looking for: Data Engineer / ML Engineer roles (remote, or hybrid in Akron/Cleveland, OH) πŸŽ“ Currently: Finishing an M.S. in Data Science at the University of Pittsburgh (expected 2027) πŸ”§ Building: A dbt + Postgres data warehouse for job market analytics (star schema, CDC, Type-2 SCD)


Featured Projects

akoya-pcf-pipeline Production pipeline processing spatial proteomics imaging data (Akoya PhenoCycler Fusion) end-to-end β€” ingestion, illumination correction, cell segmentation (Cellpose), feature extraction, phenotyping (Scanpy/Leiden/UMAP), and spatial analysis (Squidpy). Containerized with Docker, GitHub Actions CI/CD, and HPC/Slurm deployment. Python Docker Cellpose Scanpy Squidpy HPC

lab-accession-app Desktop application that replaced a 47-sheet shared Excel accession log with a real SQLite-backed system. Packaged and cross-platform (Windows/Mac) via PyInstaller and GitHub Actions CI/CD; demoed to lab staff with positive feedback. Python CustomTkinter SQLite PyInstaller

job_market_analyzer Data pipeline analyzing job market trends β€” currently being rebuilt into a proper star-schema warehouse (fact/dimension tables, dbt snapshots for Type-2 SCD, CDC) on Supabase Postgres. Python dbt PostgreSQL ETL


Skills & Tools

Languages: Python, SQL Data Engineering: dbt, Snowflake, ETL/ELT pipeline design, SQLite, PostgreSQL ML / Analysis: scikit-learn, statsmodels, Scanpy, Squidpy, Cellpose Infrastructure: Docker, GitHub Actions (CI/CD), HPC/Slurm Domain: Healthcare data, HIPAA-compliant systems, clinical databases


Let's Connect

LinkedIn Β· Cleveland, OH

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  1. akoya-pcf-pipeline akoya-pcf-pipeline Public

    This is a pipeline for ingestion, cleaning, and spatial analysis of Akoya PCF images

    Python 1

  2. job_market_analyzer job_market_analyzer Public

    Web scraper and data pipeline to analyze job market trends

    Python

  3. lab-accession-app lab-accession-app Public

    This is an application for use in accessing laboratory samples.

    Python